Mohsen Rastgoo Shahrestani, MSc
Bioinformatician . Transcriptomics
I am a bioinformatician in Prof. Civiero's lab at the Department of Biology, University of Padova.
I work at the center of the central dogma where transcription sits, currently figuring out my future.
Here are the ways we can get to know each other:
Here I share challenges I face in my work and the resolutions I find for them. Not tutorials. Not polished guides. Just honest write-ups of what I tried, what broke, and what I learned from it. If you read something and it sparks a thought, reach out via LinkedIn.
When the pretty plot isn't the answer: my RUV-seq journey
I was obsessed with making the PCA look right. Then I stopped decorating and started analyzing.
When the conversion should be one line but it's not: AnnData to Seurat
AnnData to Seurat object conversion via Matrix Market — every off-the-shelf tool failed, so I did it by hand.
In Data Analysis We Trust: how one talk rewired my workflow
A Nextflow Summit keynote gave me the answer I'd been quietly looking for. So I rebuilt my workflow around it.